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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs72724695 chr14:59590174 A/G 5.08E-10 488 15.9 16.22 5.8 KM Plot
THCA rs72724697 chr14:59591624 T/C 4.73E-10 489 15.93 16.22 5.8 KM Plot
THCA rs72724702 chr14:59593916 C/A 5.3E-10 487 15.9 16.23 5.8 KM Plot
THCA rs72726305 chr14:59597408 G/A 5.3E-10 487 15.9 16.23 5.8 KM Plot
THCA rs72728213 chr14:65425458 G/T 0.000323 481 16.38 13.83 11.33 KM Plot
THCA rs72728215 chr14:65427761 G/A 0.000303 481 16.4 13.6 11.33 KM Plot
THCA rs72737704 chr15:41323575 C/G 0.000136 490 15.17 16.3 16.83 KM Plot
THCA rs72739495 chr15:65775713 A/G 0.000274 478 15.15 15.98 17.48 KM Plot
THCA rs72740710 chr15:65824449 A/G 0.000154 483 15.48 15.87 18.33 KM Plot
THCA rs72753995 chr1:224368202 A/G 9.78E-5 484 16.63 14.93 12.43 KM Plot
THCA rs72755209 chr5:65545664 T/G 5.23E-10 488 16.25 13.5 6.57 KM Plot
THCA rs72755909 chr1:224393211 C/A 5.97E-5 483 17.03 13.77 12.52 KM Plot
THCA rs72755915 chr1:224393599 C/T 7.18E-5 484 16.73 14.38 12.52 KM Plot
THCA rs72772885 chr2:225437 T/C 5.5E-12 485 15.93 15.17 20.63 KM Plot
THCA rs72772889 chr2:231583 C/G 5.59E-12 486 15.97 15.3 20.63 KM Plot